rs241640383 SNP Detail

Summary

• ID
  rs241640383
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135436246 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTGTTGGG ATCCACATAC TCAGTATGAG
  AAGAGTGAGT GCCGTGGGTC CTGGTTTTCG GTGCCACCTG GGATGGTGAG GCTGGAGCTT
  GCCCACCACC CTGGGAGCTC ACCCAATGGA GGCAGTGGTT CACAGAACGA TGTCTTGGTG
  Y
  GGCCAGCCTT GCAACCCTAA ACTTGCTGCA GTAGCTCTCC ACTAGGTTGG GTGCCCAGCT
  TCCTGAGGAC AAGTCATGAT TATGTGGCAT GGCACCTGCA GGTGTCACCG TAGACTGCCG
  CCGGTCAGAC CCCAGACACA GGCTGAGCAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321352843	CHEV_4_135264850	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241640383					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135436246 () rs orientation: forward

Symbol	Name	Function Class
Ifnlr1	interferon lambda receptor 1	754 bp downstream
Rr602110	regulatory region 602110	22 bp proximal
Rr602111	regulatory region 602111	91 bp proximal
Rr602112	regulatory region 602112	303 bp proximal
Rr602113	regulatory region 602113	535 bp proximal
Rr602114	regulatory region 602114	810 bp proximal
Rr602115	regulatory region 602115	1509 bp proximal