rs241470988 SNP Detail

Summary

• ID
  rs241470988
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21985304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTTGGATT TTTGTTGTTG TTACTGTTGT
  TTGTTTTGTA AAGCAAAACA AATTTGATCA ACCCAGGTTA ACCTCATGCA GTTCTCTACC
  ATTTCCATTC AGAGTTAAGG TCCCATCCAG GTTTAAGAAC CATCCAGGAA CATTTCATGG
  Y
  TAGATGTACA TAGAAACCAA GAAGATTTCA AAATAGTAAC AGCTCAACGC AGAAAATTTC
  TGAATCCAAT TTTTAAAATT TACTAAAACC TTCATTTTAC CTGTTTTCTA ATATTTATTA
  Atttgcttat ttatagacat ggacttgcta                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320683682	CHEV_3_21830062	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241470988					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21985304 () rs orientation: forward

Symbol	Name	Function Class
Gm31813	predicted gene, 31813	within coordinates
Rr574163	regulatory region 574163	740 bp proximal
Rr574164	regulatory region 574164	1702 bp proximal