rs241375880 SNP Detail

Summary

• ID
  rs241375880
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141461395 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACCTTCAGA AGAGCAGTCG
  GGTGCTCTTA CCCACTGAGC CATCTCACCA GCCCAAGAAA CAACTTTAAA GATACAAAGT
  TGTTACAAAG TCTCCTGAGT GGGCACGATC AATATTTTGG GTACAATAAA AGGATTTTAG
  CCACTTGGGA TAAGTTAACA TTATGTTTTG AGAAAGCCTC CTGTGGTCTC TGCTAGCTTC
  A
  AAGTCAGGGT AACGCTCAGG AGGGCCTTGA ACTTGGCATC TTATTGGCAG TCCTATATGC
  TCAGATCACA AGCCTACCCT CTTTGGTATA GGAACTGGAC TCACAACTAA TCGCGCTGCA
  TCCTCAAACT ATACTTTTTT TTTTTAAACA AGATTTATTT TGTGTGTATG GATATTTTGC
  CTGCAGGCAT AGTTAATATG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389368	CHEV_4_141289999	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241375880					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141461395 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15242	CpG island 15242	832 bp proximal
Gm34863	predicted gene, 34863	within coordinates
Rr603869	regulatory region 603869	1612 bp distal
Rr603870	regulatory region 603870	568 bp proximal
Rr603871	regulatory region 603871	1069 bp proximal