rs241233868 SNP Detail

Summary

• ID
  rs241233868
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93138473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCGAGCC CTCTAGTCAC
  AAGAAAATGC AGATTCAATG GCAGGCTTGG GACTCAGAGA TTTACAGCGT CAGGAGATGC
  CCTGGAAAAG GCAGTGCTGT GGAGACAGAA AAACCCACGT GGGTGCTGGG ACGAGAGGGA
  AGGGAGGAAC GACCAGGTGG GGCTTCAACA CCTCTAGGGA AGTGAGATTA TCTTATGGAC
  R
  CTCCATAGGA GACACGTGAC ATGTTTGTTC TCATTTATCA GAACACACAG AACTGATGTG
  AGTGATCCCC CACATAGGCT TCAGACTGCG GCAGTGACAT GCCAGTGGGT GTTCAGTGAC
  TACGACACAG TCTCAGTGAG GTACGTTCTC GGTGGGTGGC TGTGTCTGTG GTGATGGGGG
  GCATATCAGA ATGCTTCCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320395324	CHEV_2_93148285	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241233868					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93138473 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr561150	regulatory region 561150			1651 bp proximal
Tspan18	tetraspanin 18			Intron
				Noncoding-Transcript-Variant