rs241221799 SNP Detail

Summary

• ID
  rs241221799
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:58661172 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAACATCTC AAAGATGGAA
  GAATTGGGAT TTTCTATTAT TCAAAAAGGA TTCATGATCT TAAAGGATTC TTAGTAGAGA
  AAAATAAGGG TGAACTTCCT TAACAAGCTT GGACCTACTG AAAGCTTAGG AAATCACCCT
  GAAAGGCAAG AAATCAATGT ATTTTCTGTA AAGACAGAAA CATGGTAAGA ACCATAATCA
  R
  TGTTTCTATG CAACATGACC CTGAAAGTTC TAGTCTGGGA GTGAAACAAG AAGGGAAGGA
  GAAAGGGGAA ATGACGTGCA CACTGGTGAA GCAAAAACAA ACCATGAGTT ATTTTCTGGT
  AATGTTTCTC CTACTGAGAA ATCCTTCAAA TAAAATAGGC AACATACAAT TTATATACCT
  GCATGATTGC AACATAAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321138683	CHEV_4_58674044	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs241221799					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58661172 () rs orientation: forward

Symbol	Name	Function Class
Rr592921	regulatory region 592921	333 bp distal
Rr592922	regulatory region 592922	786 bp proximal