rs240936835 SNP Detail

Summary

• ID
  rs240936835
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:10314225 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CATCACCAC TGGATCCAGT GTCTTGTGTG
  CATTTTCAAG TGCCCACCAA AGAATTTTAT TCTCCCAGGG GCACATGTAC TGgccaactt
  aacaggacct agagccacat gggaggaatc ttaaggagga attatcttga tcaggtaggc
  S
  cgttggtatg tctgaggggt tgccctgatg gttaactgat gtaggaagcc ccagccTCCC
  CATCCCCCCT TTATGGTACC ATTGTCTATG CTGAGAAATA CCTGGGTGGG tatcccgagc
  ttatccccgt cccgcgggaa ataaacacag                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320653145	CHEV_3_10249165	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240936835					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:10314225 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fabp12	fatty acid binding protein 12			Intron
				Noncoding-Transcript-Variant
Rr397603	regulatory region 397603			280 bp upstream
Rr573595	regulatory region 573595			1682 bp distal
Rr573596	regulatory region 573596			135 bp proximal
Rr573597	regulatory region 573597			394 bp proximal