rs240902316 SNP Detail

Summary

• ID
  rs240902316
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:98780125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTTGTTTG GGAAATTATT TCAGTGTGTA
  TGCAGTCTTA GGTTTCCTTA TCATACCCAG GACACTCATT TATTCAACAA ATACTgactg
  aggcaggagg atgctgagtt tgagactggc ctgggctata caagatcaag ccacccaaga
  M
  cttgtccaga aaaaGGGAAA AAGGAAAAGA AAAgcatacg tctataatcg aaggatttaa
  gaggtgaaga caagaaggtc aggaggagtt caaactcatt acggcctcag ctatgtagtg
  agtttgagcc caaaagacct tgttctaaaa                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325079232	CHEV_15_98712675	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240902316					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98780125 () rs orientation: forward

Symbol	Name	Function Class
Rhebl1	Ras homolog enriched in brain like 1	Intron
Rr404611	regulatory region 404611	649 bp downstream
Rr509205	regulatory region 509205	274 bp distal
Rr509206	regulatory region 509206	1230 bp proximal
Tssr136315	transcription start site region 136315	1004 bp upstream
Tssr136316	transcription start site region 136316	928 bp upstream
Tssr136317	transcription start site region 136317	863 bp upstream
Tssr136318	transcription start site region 136318	834 bp upstream