rs240704093 SNP Detail

Summary

• ID
  rs240704093
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:115854772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cgcctttaa tcccagcact cgggaggcag
  aggcaggtag atttctgagg tgaggccagc ctggtctaca gagtgagttc caggacagcc
  agggctacac agagaaaccc tgtctcgaaa aacaacaaCA ACAAAAAAGC AACCCCCCCC
  M
  AAAAAAAAGA AAGAAAGTGA GGCCTCTTCT CCACCTCCAG CAGCCAAGGG AGGCTAATCC
  TCTAAGTTGG CAGAAAGagc tgggcagtgg tggcacatgc ttttaatcct agaggttggg
  aggcagagac aggcagatct ttgtgaattt                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321916832	CHEV_6_115827829	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240704093					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115854772 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ift122	intraflagellar transport 122			Intron
				Noncoding-Transcript-Variant
Rr637086	regulatory region 637086			957 bp proximal