rs240622310 SNP Detail

Summary

• ID
  rs240622310
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54458905 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACCCACAT GGTGGCTCAC
  AACCATCCTA TGACTCCAGT TCCAGGGGAT CTGATGCCCT CTTCTGGTCT CCATGGGTGG
  CACCTGCACA TAGTAGTGCA CATACATATA ATTAGGCATA TATATATATA TATATGTATA
  TATATATATT ATAAAAATTT AAATACTCTA TATGCCTAGT TCAGTTACAA ATAAAGCATA
  M
  CATGTATCTC TTGAATTAAT GTATGTACAG CTCAACAGAC AACCATGAGC AAGCACCCTT
  ACCCCTTACA CTCCTCTACA CATGTCAATA TCGCAAGATC TCATCTCCTA CTTCCCTTGC
  TGTGCATCAG AATGGGAGAT CTGGTCCCAG GAATTTTCCA TAGAGCCCTG TAGAGCCTGG
  GCTGAGAGCA CTAGTTCGTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320771848	CHEV_3_54355406	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240622310					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54458905 () rs orientation: forward

Symbol	Name	Function Class
Rr576802	regulatory region 576802	421 bp proximal