rs240622308 SNP Detail

Summary

• ID
  rs240622308
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132616354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAAGGCGT GTGCCACCAC
  CGCCCAGCTT ATTTATTTAT TTTATGTATA TGAATACACC ATAGCTCTCT TTAGACACAC
  CAGAAGAGGG CATCAGATCC CATTACAGAT GGTTGTGAGC CACCATGTGG TTGTTGGGAA
  TTGAACTCAG GTCCTCTGGA AGAGCAGTCA GTGCTCTTAA CAGTTGAGCC ATCTCTCCAG
  Y
  CCGATTCTCA CTTTCTAAAG CTGCGTTCTG CTATTTTCTG TTTCCAGCTA ATGACTGTCA
  CAATGCACAA GCATTACTCT ATGTCAACAG CACGGAGAGC ACATAACTTA AGACTGCAGC
  TACGAATTAA CTTAGGCTAT AAAAGTGGAT TATGTGGAAA ATCCAGGGCA AATAAAACAG
  GTTGTTTTTT TGTATTTTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337162	CHEV_4_132444958	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240622308					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132616354 () rs orientation: forward

Symbol	Name	Function Class
Rr601104	regulatory region 601104	1362 bp distal
Rr601105	regulatory region 601105	1178 bp distal
Rr601106	regulatory region 601106	1068 bp distal