rs240596540 SNP Detail

Summary

• ID
  rs240596540
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:104454277 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGCTCCCAG GGACATGGCA
  TTTAGAGGTG GCACAGTAGG TAGGTGAAGT CAGAGGGAAG ATCCCCAGAA TAGAATTAGC
  ACCCACTTAA GAAAAGGGAG ACCTAGAATG TTCTGACACT TACCCTCCTG CTTCCTTCTT
  CTCTTCTTCA TCTTCACCAT ATTCTGTACT GCACATGGCT CATGGAGCTC CATTAGAAAG
  M
  GACAGACAAG ACCACGAGTA GCTCTTGGGA ACACAACGTG TGATAGTGCC CATCTGCAAG
  CCTGGAAGAG CACCAACCTC CCACACCTTC ATTTGGGTCT CCCCAGCACC TGACTTGTGA
  GAAAGGAATT TCTGCTGCTT AAACCACAGA GTCTACCCTA TTTCACTGAG CCGTTCGGCG
  CTGCACGATA CCTCTATAAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321241236	CHEV_4_104269685	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240596540					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104454277 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab1	disabled 1			Intron
				Noncoding-Transcript-Variant
Rr596483	regulatory region 596483			436 bp proximal
Rr596484	regulatory region 596484			983 bp proximal