rs240569438 SNP Detail

Summary

• ID
  rs240569438
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:73073206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGG ACTCCACAGA ATGACGAAGA
  S
  AGCTTGGCTT GCTGGTACAG CTGGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322260077	CHEV_7_80568344	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240569438					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:73073206 () rs orientation: forward

Symbol	Name	Function Class
Gm44645	predicted gene 44645	within coordinates
Rr380947	regulatory region 380947	within coordinates
Rr648940	regulatory region 648940	1655 bp distal
Rr648941	regulatory region 648941	844 bp distal
Rr648942	regulatory region 648942	1139 bp distal
Rr648943	regulatory region 648943	786 bp distal
Rr648944	regulatory region 648944	550 bp proximal
Tssr72937	transcription start site region 72937	918 bp upstream