rs240526506 SNP Detail

Summary

• ID
  rs240526506
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87074178 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATCACTGT AGCCCAAACT CCTCTCTGCT AAAATCCTCC
  AGCTCTGGCC TTCACGCTAC TATAGCAGCA ACTTAATACC AACCTACAAA CCTACACAGA
  M
  ACACACACAC ACACACACAC ACACACACAC ACACACACAC ACACACACAC ATACACACAC
  ACACTGGGCA TAGTGTGTGT GGTATGTTTG GGGGTTTTA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320831207	CHEV_3_86970793	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240526506					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87074178 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr2003	regulatory region 2003	682 bp distal
Rr579452	regulatory region 579452	926 bp distal