rs240520746 SNP Detail

Summary

• ID
  rs240520746
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138111916 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATTCTCTA AAGTAGGGCT
  GCTGGGGTCA CTGTCCCCAG AAGGGAGCCA CTGAGCAGTG ATATGGGTGA GGTGGCGACA
  GACCGGGAGT TGTGAACACC TATGGGAGTC ACTACTGGTT GTCACCTTGG CAGGCTCTAG
  ACTCACTGAG TGTGTCTCAC ACCTCTGAGC ATGTCCCTGA GGGAGTTTCT AGACTGGGTC
  R
  GTCATGGGGG GAGAGACTGT GGTCGATACA ATGCCATGGG CTGGGACTGG ATAAAGCAGA
  GGTGGCTAGC TGAGTGATGG TATTAATCTC TCTCCCTGAC TTCTGATGTA ATGTGACCAC
  TCACCATCTC TTCCTCTCCC GTAGCTTCTC TGACATAATG CACTCTTAAA CTGTAAGCCC
  GAATAAACCC TTCTTTCCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321372992	CHEV_4_137940520	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240520746					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138111916 () rs orientation: forward

Symbol	Name	Function Class
Rr602903	regulatory region 602903	1934 bp distal
Rr602904	regulatory region 602904	424 bp distal