rs240435121 SNP Detail

Summary

• ID
  rs240435121
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:106897580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTGTATT AGATTAGGGT
  CTAAGAAATT CTCAATAATG TTTGTAATAG AGAAGTCTCT GGGCAAAAGT TACAATTCTT
  CCTTTCTCAT TTTCCCTAGA GCATTGAAAA AAGTCTTTCT GAAACTGACA TGATAAAAAC
  ACTTATGGGG CTGGGCAGTG ATGGCTCATG CCTTTAATCC TAGCACTTGG GAGGAAGACG
  T
  AGGTGGATTT CTGAGTTTGA GGCCAGCCTG GTCTAAAGAG TGAATTCCAG GACAGCTAGG
  ACTACACAGC GAAACCCTGT CTTCAAAAAC AAAAACAAAA ACAAAAAACA AACAAAACAA
  AGCAAAATAA AACAAAACAA CAACAATAAC AGCAAAAACA CTTATGGGGT TCTTATAAAC
  ATAGTTCATA GATCCCCAAA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321887635	CHEV_6_106870613	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240435121					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:106897580 () rs orientation: forward

Symbol	Name	Function Class
Rr635980	regulatory region 635980	333 bp proximal