rs240408662 SNP Detail

Summary

• ID
  rs240408662
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:102341328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCCTACT AGAAAACTCA
  TGGAAAAAAG TCTTAAGGGT TTTGCATACT TGGCCAGATG CTGATGTAAG TCCAGAGAGC
  ATTGATAGTC ATAACAGTGA GTGGCATCAC ATGAGCACTG ACCAAAGCAC TCAAGCTACA
  GACTGCCTGG CATCCCAAAC ACTCACCTTT TGGTCTTGCC AAACTTGCTG GAGTTTAAGA
  T
  GTTGGCTGTA TGGCCACTCT TTAAAGTATT CTGCTGGTTT ACTATGGAAA GGCTATGAAC
  ATGTACACCA AAATGAATAA TAATGATACC GTTTTACATG GAATTTAGAA GTTCACTTGT
  AGGCTTTGGC TGACCCCAGT TTCACCATTT AAGAACCTGC CCTCTTTGCC ATTAAGAAGA
  ATTCAGAAGG TTGGAGAGAT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321233785	CHEV_4_102156736	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240408662					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102341328 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Pde4b	phosphodiesterase 4B, cAMP specific			Intron
				Noncoding-Transcript-Variant
Rr596250	regulatory region 596250			434 bp distal
Rr596251	regulatory region 596251			758 bp proximal
Rr596252	regulatory region 596252			866 bp proximal
Rr596253	regulatory region 596253			1051 bp proximal