rs240378254 SNP Detail

Summary

• ID
  rs240378254
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:16363868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCACACAA TAATAGTGGG
  AGACTTCAAC ACACACTCTC ATCAATGGAC AGATCATGGA AACAGAAACT AAACAGAGAC
  ACAGTGAAAC TAACGGAAGT TATGGACCAA ATGGATCTAA CAGATATTTA TAGAACATTT
  CATCCTAAAG CAAAAGAATA TAACTTATTC TCGGCACCTC ATGGTTCCTT CTTTAAAACT
  S
  ACCATATAAT TGGTCACAAA ATAGGTCTCA ACAGATACAA GAAGATTCAT AAAATCCCAT
  GCACCCTATT AGATCACCAT GGAGTAAGGC TGGTCTTAAA TTCCAACAAA AACAATGGAA
  AACACACACC CATGGAAGCT TAACAATTCT CTCCTCAATG ATAACTTGGG CAAGGAAGAG
  AAAAAGAGAT ATCAAAGGCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320671127	CHEV_3_16209704	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240378254					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:16363868 () rs orientation: forward

Symbol	Name	Function Class
Rr573795	regulatory region 573795	1253 bp proximal
Rr573796	regulatory region 573796	1329 bp proximal