rs240305976 SNP Detail

Summary

• ID
  rs240305976
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107182849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGCTAAGT AAACACAGAA
  AAACTCCAAC CCATCGAGTC CAATGCTCTG ATATGGGTGC TTGGGATTTC CCGCCATCAT
  TCCAGAACCA GCTCCCAGCA TTCAAAACTG GAGGAGTCAT CAAGGACCCT GAATGCTAAA
  GAAAGCAGAA AGCGTTGCAA AGCTGACATC CCCCAGAAGC ACCACCCTAG TTCCCAGCAC
  Y
  TGGCTGCTTA CATAGCTTTC CTTCCCCTCA ACCCAGCTGT GCAGGACCAA AGGAAGCGAG
  ACAGAGAGAC AACAGCCTAT CCCCGTCACT TCCCACACAT CAAATCCTCC CTCTTCCTGA
  TTTCTTCTCT TCCCCTGAAA GGCCTAGCTT AGACCTTAAG AAGCTGTAGG CATTCTGAAA
  ATCTTTTAAT CATTTTTCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320865167	CHEV_3_107078451	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240305976					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107182849 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	1273 bp distal
Rr582952	regulatory region 582952	1489 bp distal
Rr582953	regulatory region 582953	673 bp proximal