rs240291178 SNP Detail

Summary

• ID
  rs240291178
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135666611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTGCCACC TACCGTTCTG CCGGTGGAGT
  TTGCGTGGAC TCTGAAGCTG ACAAAGGTGA ACTGATCAAA GGAGCTCAAG GACAGACTGC
  CTGGGGCGCT GCTTACCATC CCTGCAATAA AGTAGCTTCC CTTCCTTCCA CCCAGTGGTC
  R
  ATCTCCCAAG CCGTTCTAAT GGATGGGCGA GCCATTGCTA GCATTTCTGG TGGGCAGAGA
  GACCTGGCCA GCTCAGCTGA GTCACCCATG CCTCCACTAG GGTGGAACTT CCCTCTCTTC
  TCTGATGACC TACCTGATAA TGAGCCAAGT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321353530	CHEV_4_135495215	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240291178					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135666611 () rs orientation: forward

Symbol	Name	Function Class
Fuca1	fucosidase, alpha-L- 1, tissue	mRNA-UTR
Rr602205	regulatory region 602205	164 bp distal
Rr602206	regulatory region 602206	130 bp distal
Rr602207	regulatory region 602207	1923 bp proximal