rs240108525 SNP Detail

Summary

• ID
  rs240108525
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146048483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGACTTGT AGGTAAAAAT
  GAAGAATGTG AAGGAAATGC TGGATAGGGG AAGAGGGAAG AAGATCTACA AGTCATTGGA
  CCTTAAAATT CCACTTGGAA ACAAAGAACA ATGTAACTTC ATCATGAAGC CATTTGCACC
  CTCTTTGCAA TGAAACACTG CTTTCTCATT TGATTCTTAA GGCAAAGAGC TATCTTGAGT
  A
  AAAAAAAAAA AAAAAACACA AGACATACAC TGTGTGTGTT TGACTGTGTC TATCTGGGAA
  ATCCTAGTAC TAAAAGAGCC AAGCCTGGGT GATAAAACAG CAAAGTGGCA ACTAGATTGG
  TGGAAAAAGC TCAGGTGAGC ACATGGCCCA CAGAGGTGCA AGCCAGAGAG AGGTGATACA
  ATGTGTCCAG AGACAATGGC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321010001	CHEV_3_146005692	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240108525					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146048483 () rs orientation: forward

Symbol	Name	Function Class
Rr587007	regulatory region 587007	236 bp distal
Rr587008	regulatory region 587008	976 bp proximal
Rr587009	regulatory region 587009	1085 bp proximal