rs240093215 SNP Detail

Summary

• ID
  rs240093215
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98132508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTCCCCAGC AGGGGAACAT TTTTACCTCA
  GGAGCCTATT CACTTTGGTA GCCTTGGCAG GGAACGTTCC AGAAGCTTTG ATTACACAAA
  TACCTCTGCT AGGTACAGGC TCGGTCTTGG CAACCTGGGG AGAGAGAATG TGCACGTAGG
  Y
  TGATTAAACC AAACGACCTG TTTCCTTTGC TGGGACTGGG GGCTGGGGGT CTTCAGCTTG
  GAAATGATGT TTTTCCTTAG CTGCGTTGCC TGGAGACTTG GAGGGTTTAA TTAGGGCTGG
  GGAGGTTTTT TTGGCTTCTA CAGCTGCCTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321220429	CHEV_4_97910962	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240093215					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98132508 () rs orientation: forward

Symbol	Name	Function Class
Gm70434	predicted gene, 70434	within coordinates
Rr406792	regulatory region 406792	within coordinates
Rr595714	regulatory region 595714	14 bp distal
Rr595715	regulatory region 595715	555 bp distal
Rr595716	regulatory region 595716	within coordinates
Rr595717	regulatory region 595717	1886 bp proximal