rs240083596 SNP Detail

Summary

• ID
  rs240083596
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132245610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCACCCCC CTTTCTTGTG
  TTGGGGACCA AGCCCTGGGC CTTGAGCATG TTAGGCTCAG TATCCTCAAC TTCCTTCTAC
  TTTTGCAAGT ACTTATTGAC CTTTGCTCGG GGGTCAAGGC ATAAGGCAAC CACAGGAGTT
  TCTCACTCGC TTTCCCGACT TTTCTCCTCT CCTTTAGGTT AGTAGTTAGG TAATCATTAA
  Y
  TCCCCCCTCC CGCTTAAGAG ACAAGGTCTA CTACTTTGTG CAGCTGGCAT TAAAAACTTG
  GGCTCAAGCC TGGTGTGGTG GCTCAGACCT TTAGTCCCCC CACCCTTGCC CCCGCCCCCA
  ACCCGTACTC GGAAGGCAGA GAGCTCTGAG TTTGAGGCCA GCCTGGTCTA CAGAATAAGT
  TCCAGGATGT CCAGGGATAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321334005	CHEV_4_132074214	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240083596					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132245610 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
Rr377207	regulatory region 377207	1984 bp downstream
Rr600999	regulatory region 600999	within coordinates