rs240041595 SNP Detail

Summary

• ID
  rs240041595
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:96449178 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTATCAATG CATTTCACTC
  CTGAAGCCTT CCACATCTCT CCCCAGGGCC CAGCCCTTGC TCCCTCCCTC TCCCATCTCT
  CTCTGTCTCT GTCTTTCTGT CCCTGTCTCT CTGTCTCTTT TTGTCTGTCA CTGACTCTCT
  CTTTCTCGCT CTCGCTCTCT CGCTTTCTCA CTTTTTCTTT GTCTTCTGCT CTCTTTGACA
  Y
  GAGTGGTCCA GTTAAGACCT AGAACTCTGG GGCTGGAGAG ATTGTTCTTC AAATAAGAGA
  ACTGGCTGCT TTTGCAGAGG GCTTAGATTC AGTTCCAGAA TCCATGCTGC ACCTCACAAC
  TGTCTATAAG TACAGTCTCA GGGGGTACAA TGCCCTCTTC TAGCCTCTGA GGACCCTGCA
  TGTAAGAAAA CTGAGGCAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321216607	CHEV_4_96227632	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240041595					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:96449178 () rs orientation: forward

Symbol	Name	Function Class
Gm69146	predicted gene, 69146	within coordinates
Rr595513	regulatory region 595513	101 bp distal