rs240021391 SNP Detail

Summary

• ID
  rs240021391
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98129218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTGACCAG CTGGGCCATG
  CACCCAGCAG GAGGGTGGGG ATGACACAAG AAAACATGGC GACCAGAGAG CCACTTTCCT
  GCCTTTTGGT GAATAATGAA ATCTGAGTCT GCCCATTCAA GAAGAAACTG TATATTAAGC
  TAAGCATGAA AATTCTGCTT TTCTAGCGAT TCTTTTCCCC CCAAAAAAGA AATTACTTTT
  Y
  AAGACATTGG GGTAAGCTAG AACTTTCTGA ATAGAACAGC AATAATAGCA CAAGAAGTAG
  CTCCAAGAAT CAACATATGG GGCTACATGA AATTTAAAAG TCTCCTTTCG GCAAAGAACG
  CTATCAATGG AGCACCCAGA CAGTCCACAG GAGAGACCAT CTTTACCAGC CATACTTCAG
  ACATTGAGCT GACACACAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321220423	CHEV_4_97907672	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs240021391					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98129218 () rs orientation: forward

Symbol	Name	Function Class
Gm70434	predicted gene, 70434	within coordinates
Rr406792	regulatory region 406792	1401 bp proximal
Rr595713	regulatory region 595713	330 bp distal