rs239985734 SNP Detail

Summary

• ID
  rs239985734
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151795286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTGGCCCA CCTGGGCCAT
  GAAATGAGAT AGGCTCACCT GGATGAGCCT ACCTGGAAGA CAGTTAATTC ACTTTCATGT
  ATTATTATTG TTATTATTAT TACATTTAAT GTTTAATTTG ATATTATTGT TATTATATTA
  TTATGACAGT TCATTCACTT TAGATTGTTA TTATTATGAG TGTTTTGCCT GCACGCACGT
  A
  TGTGCCCAGA GACCAGAATT GGATATCAGA TGCCCTACAA TGGAGTTACA CAGGGTCATG
  CTCCACCATG TGGGTGCTGG GAATCTAACC CAGGCACTAT GAAAGAGCAC TCAGTGCTCT
  TAACCGTTGA GCCATCTCTC TAGCTCTGAA TTAATTTACT TTTTAAAAGA CTAATCCCAA
  CTGACTATTG ATGTTTAATC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321027980	CHEV_3_151752613	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239985734					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151795286 () rs orientation: forward

Symbol	Name	Function Class
Gm31881	predicted gene, 31881	within coordinates
Rr587443	regulatory region 587443	127 bp distal
Rr587444	regulatory region 587444	223 bp distal