rs239944974 SNP Detail

Summary

• ID
  rs239944974
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149085333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACTGATAAA TGTGGGAGTC TGGGAGATAG ATGGCTTCTA
  CCCAAGCCTG GGAGAGTTGA GTTTGGTTCC CTGGCACCCA CATTAGAAAA AAAAAAAAAA
  M
  AAAAGGCCAG GAATAAGAAT GTCATCTGTG GCCACAGTGC TGAAAGGGAA AAGGAAGGAG
  AGAATTTTGG AGCAGGCTGG CCCTAACTGG TGAGCTCTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321018626	CHEV_3_149042660	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239944974					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149085333 () rs orientation: forward

Symbol	Name	Function Class
Gm30382	predicted gene, 30382	within coordinates
Gm64772	predicted gene, 64772	1490 bp upstream
Rr587318	regulatory region 587318	290 bp proximal
Rr587319	regulatory region 587319	1824 bp proximal