rs239852363 SNP Detail

Summary

• ID
  rs239852363
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:112989262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTGTTGCA TTGTTGTTGT TGGGTTTTGG
  GTTTTGGGGG GGGTGGTGGT GGTATTTCTT TTCTTTTTTA ATGTGTGGTA ATTTTCCCTA
  TAGTTTTAGA AGTTGGATTT TAAAGTCAAA CCGATACTTT TGTTCTTCTG AAGGAATGCA
  A
  CAGATACATT TGTTTCAAAG CCTGCCTTGC AAGCAATTGA TTCCATCCTT TTGATTCCAT
  CCTTGTTCCG CCTCTTCACT ACCTCTTTAC TACCCCACTC AGCGTCTTAA GGAAGAGAGA
  AGGCTGCAGA AAGCTTGTTT TGTTTTGGCt                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321909653	CHEV_6_112962295	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239852363					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:112989262 () rs orientation: forward

Symbol	Name	Function Class
Rr636433	regulatory region 636433	within coordinates