rs239771265 SNP Detail

Summary

• ID
  rs239771265
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106643901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTCCTCTC CACCCCCACC
  CCACCAGCCT CCTTTAGCTC AAACCAGCTT AGTTCTTCTC TGTGTTTAAA AAGCCATTCC
  TAAGAAGGCT TGCAGAATGG TGGAAGCAGG ACTCATGATT TACCAACTGG ATACATCTTG
  TCACTTGTCA CTTGGTCATG CCCTGGAAGA GGCCGAAGTG TCCTCTCTGC AGGTAGAAGA
  Y
  GCTGATCAGG ATCAGGCAAC CCATGGCAGA GGCTGGACCG GGCACTGCAG CCCAGGCAGC
  CCTGCAGGGG CTCACTTCTT ATACCCCAGG TTCTTCTCCG AGCCTTCAGC TCAGGGGAGT
  TGATGGACTA TAAAATAGCC CTGACCTGAC CTGGCCTCAC AGCACCAACA TACTCCCTCC
  ACTGTGTGAA AGGGACCTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321247224	CHEV_4_106459309	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239771265					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106643901 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596808	regulatory region 596808	within coordinates
Rr596809	regulatory region 596809	838 bp proximal
Rr596810	regulatory region 596810	849 bp proximal