rs239716467 SNP Detail

Summary

• ID
  rs239716467
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21861354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CACCATTGT CCTTCTGAAC TTTGTATGGA
  CCTGACAACT CAGTACTAAG TTTATAGATG TGGCACTGAC TTTTGATTGA GGACTTGCCT
  AGAAATGCCC ATTAAATTAA TGAACCAAAA AATGAATTGC AAAAATCCCT TTGCCAGCGT
  S
  tctctctctc tctctctctc tctctctctc tctctctctc tctctctctc tctctctctc
  tctcCTTACT TGCTGGAAGT CTATTCCAAT TACAGTGTGT GCAAACCAAA ACCACGTTCT
  ATAGTGTGAA ATGGTATGGA CCACGCTCAC                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320683324	CHEV_3_21706112	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239716467					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21861354 () rs orientation: forward

Symbol	Name	Function Class
Gm65770	predicted gene, 65770	within coordinates
Rr574150	regulatory region 574150	122 bp distal