rs239714001 SNP Detail

Summary

• ID
  rs239714001
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61334911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACAGCACT TCTCACAGTG
  TCTAACCTAA GTTTGTGAAA ATGTGAAAAT TTTTCTTAGT CTCTGTCACA AGCTGAGATT
  GAATCTTGTA TCTTCTTTGC AGAAGACATA TTCCAGCATG ACTGAGAAAA GTGTGTCATT
  CTCCAAATCT CCCATAGAGA TTCTCCGAAT CTCCCATAGA GCGACAGCTA CAATACAAAA
  Y
  GACCAAAGCA ATCAGTGCAT TGAGGCTCTG AAATAAACAA GCACAGGCTT TGATGATTTC
  ACTGGCGCTG TCTGCTGACA GTGACACAAG CACTCTCCCT TCTCTTTAGC ACCATTCAGT
  CTGGCAGTGG TTATATCCAG GACCAGATAA GTCCTGGAAT ATAGCCAGCA ACCAGACTAA
  TGAAATCTTC CCTGGCAGAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322228032	CHEV_7_68830049	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239714001					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61334911 () rs orientation: forward

Symbol	Name	Function Class
Gm72252	predicted gene, 72252	1342 bp downstream
Mir344d-1	microRNA 344d-1	1971 bp upstream
Mir344d-2	microRNA 344d-2	109 bp downstream