rs239596715 SNP Detail

Summary

• ID
  rs239596715
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98887024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTTAAAA TCCAAGTTTG
  GACACACAAC TATTGGATTT AGCACAGTGG AGAACAACTG TAATTTTAAC AAGTGCAGTT
  TGGATGGGAG ATAGCAGGAA AGCTAAGTTT AAAAGACAGC AAGAGTAAAA GAACTGAAGA
  TACAAGGTTT ACAAAGTAAA CGAACCAAGA CACAAAGTAT AATGGGCTCT ACTTTAAGAG
  M
  CAGCAGAGCT GGCATGATGG CACATTCCTT TAATCCCAGC ACTGGTTCTA GGATACACTC
  CCTCCCCCAC CCCCACCCCC CAATATCAGA AAATAGTGTA CAAAGTAGCA GCATGAACAC
  CAGGGAGAAT TTCTAAAGTG AGAACTAACA TGTCTGTCTG TCTGTCTATC TGTCTGTCTG
  TCTGTCTGTG AATGAAAATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321222458	CHEV_4_98665478	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239596715					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98887024 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dock7	dedicator of cytokinesis 7			Intron
				Noncoding-Transcript-Variant
Rr595814	regulatory region 595814			1852 bp proximal
Tssr42518	transcription start site region 42518			1188 bp downstream