rs239593763 SNP Detail

Summary

• ID
  rs239593763
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107601528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGGCATGT GCTAAATACT
  TTCTTGTATT AACTTGCTTT ATAGATGAAG AAACTGAGGC TGAGAAGAGC AAGACTAATA
  GCCAGCGGGC TAAAGAGATG GTTAAGAATA CTGACTGCTT TTCTGAAGGT CCTGAGTTCA
  AATCCCAGCA ACCACATGGT GGCTCACAAC CATCTATAAT GGGATCTGAC ACCCTTTTCT
  S
  GAGTGTTCTC TGAAGACAGC TACAGTGTAC TTATAAATAA TAAAATAAAT CTTAAAAAAA
  AAAGACTAAT AGCCAGTAGA CAGAAGGACC CAGAAAGCCC TCCCATTCCA GGATGGATCA
  TTTAGAGCCT GTACCCTAGT CAGTGTAGTT CTGGGCTGAA CCTATGCCCC TGATTTCAAG
  AAGAGAGAGG CCAGGTGTGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250728	CHEV_4_107416936	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239593763					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107601528 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	47 bp downstream
Rr597058	regulatory region 597058	777 bp proximal