rs239422285 SNP Detail

Summary

• ID
  rs239422285
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:73927634 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTGGACTT AGGAAATAAT GAGTATCAAT
  GTCCTAGCAA GGGAATATGC AAAGATGAAG AAGCCCTTTT GTATCCTTAA TTAAGGAAAA
  TAGTAGCAGA ACTCGTTCAC AGATAAGTGA CTGTACATAA TAATCATGTA TTTATGTAAG
  R
  GAGTGCTATG CTATATTACT GTAGTGGCAA TTAGATTTTC ACAAAGTCGT TTTAATAAAA
  GGCATACTTA CATAATAAAT AAACAAAACC GCTCATTTTC ATGGCAGGCT CTCTAATTAT
  ACACTGGCTC AAAATAAAAT GTTCTGCAAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320346651	CHEV_2_73935347	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239422285					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:73927634 () rs orientation: forward

Symbol	Name	Function Class
Rr559280	regulatory region 559280	within coordinates