rs239384817 SNP Detail

Summary

• ID
  rs239384817
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38841299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGCCACA AAGCTTCAAC
  CCTGGCACTC TCCACGCAGC TTGTAGCAGG TTAATGGATG GTTGTGGAGT CTCAGCTCAG
  CAGCAGCCTT TATTGCTTAC AAAATCTTGA GTGGGGAGGG ACCTTATGGG TATATTTATC
  TACACACACT GAGCTGTATT TTAGTTTCAA AATTCCAAAA TTTAATTTCA ATTGAGAGGT
  R
  ATAGTGTTAT TGTTGCCAAA AACCATTTTG TGCTAAGGAA AGCTATAACC TGCCAAAATA
  GGAACCACCT AGAGTTAGGG TCAGGGTAGG GTTTTTCTTT TCTCTTTCCA GGAGAATAAA
  AGCATCCAAC TAAGGAAGCT AGAGACCACT GGACACATGA AATATCTGGA GACAGAGGAC
  AGATCAAGAA AACAATGTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320723052	CHEV_3_38686072	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239384817					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38841299 () rs orientation: forward

Symbol	Name	Function Class
Rr575703	regulatory region 575703	1686 bp proximal