rs239344637 SNP Detail

Summary

• ID
  rs239344637
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132614949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctggtcttc agagtgagtt ccagaacagc
  cagggccaca caaagaaact atgacttgaa aaCCCCAAAA CCAggctgga gagaaatggc
  tcaggggtta agagcactga ctgcttttcc agaggtcctg agttcaattc ccagcaacca
  Y
  atggtggctc tttcatggga tccaatgccc tctgctggtg tgcctgaaac agctacagtg
  tactcatata cattaaataa gtaaataaat AAAGTGTTgg gctggagaga tagctcagtg
  gttaagagca cggactgctc ttccaaaggt                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321337148	CHEV_4_132443553	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239344637					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132614949 () rs orientation: forward

Symbol	Name	Function Class
Gm13033	predicted gene 13033	1222 bp downstream
Gm70413	predicted gene, 70413	1422 bp downstream
Rr601104	regulatory region 601104	22 bp proximal
Rr601105	regulatory region 601105	206 bp proximal
Rr601106	regulatory region 601106	316 bp proximal