rs239305615 SNP Detail

Summary

• ID
  rs239305615
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138112642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGGGAATT GCAACTTATT
  GTCTTAAGGA CAGAGTACTC AGGACTTGAA CGGGGTTGGT GAGAACCAGG TTTGCCAGGG
  GACTTGGTAT TGCTTCCTCA ATCTCCCCTC TTCTTAGCAA AGGCACTCCC TTCCACCCTC
  TCAACAACTC TAGCAGGAAG TGAGCATCTC TTTCCCCAAC AGTTCCAACA AAAGTCCAGG
  S
  ACTAAGCTCC CTGAGTACCG AATGTGACCC CAATACCATT ACAGTGTGAA TGTGAAGTGT
  CCACCACAGG TTCACGTGTT TGAACATTTG GTCTCCAACT GAGTGGCTCT GTTTCATGAG
  GTTATGGAAC CTGTAGGAAT CAGAGCTTCA CTGGAGGAAG TGGGTCAGGG GACAGCAAGG
  GGGGGTGCTT AAGTTTATAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321373003	CHEV_4_137941246	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239305615					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138112642 () rs orientation: forward

Symbol	Name	Function Class
Rr602904	regulatory region 602904	1150 bp distal