rs239242014 SNP Detail

Summary

• ID
  rs239242014
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119830517 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttccccat agcaacttcc ctggcctcag
  ttggggccca taaactcatc catccaccag aaagcagctt ccctataaac ctgcctttaT
  ACaaaaaata aaaaataatt ttaaaaGAGA GAGAGAGAAA CTCAGATGTT TGCCAGAATT
  R
  CTGAAGTCTG GACTAGAGAA ATGCTTCGGT GTGAAAGGTG CTTATTCCCA CTGTAACTCA
  AGTTCCAGAG GACTTGATGT CCTCACACAG GCATGTGAGG TGAAACACCA ATGCACataa
  aataaaataa attatttttt taaaaattaC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321929501	CHEV_6_119803574	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239242014					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119830517 () rs orientation: forward

Symbol	Name	Function Class
Rr380000	regulatory region 380000	396 bp upstream
Rr637739	regulatory region 637739	719 bp proximal
Rr637740	regulatory region 637740	1988 bp proximal