rs239224460 SNP Detail

Summary

• ID
  rs239224460
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:54458493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGAGAGG GAGAGAGATG
  GGATGGGGAG AAAGGGCAGG GAGAGAAGGA ATAGAGAGTA AGAGAGCAAG GAGAGCCCAA
  ACAGCCCCTT TTATAGTAAG CTAGGCATTA CCTGGCTGTT GCAAGGTAAC TGTGGGGCAG
  AGGCTAGAAG GAATGCTAAC ACATATTGTA TGGTTCCTGG GAAAAGAGGG GAGGAGAGAG
  R
  CAGTGACCAT GAGGAGTACA AAATGAGACC TCGGGATACT AATAAAGGCT CCATCTCTAA
  CACCTGTGGA GGAGTGTGAG GGTGTTTGCT CATGCTCATC TGCTGAACTG GCATCTATCC
  TATGTCTACT TACTTTGAAA ATAATCCTAG ACCTATGTGG CTGGAGAGCT GGCTCAGCTG
  GCTGTGGCAG AGAACCTGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320771845	CHEV_3_54354994	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239224460					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:54458493 () rs orientation: forward

Symbol	Name	Function Class
Rr576802	regulatory region 576802	833 bp proximal