rs239195247 SNP Detail

Summary

• ID
  rs239195247
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152062914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCACACACC GCCCTGCTCT
  CCTCCTTTTT GTGAGAGCAA AGGAGCAGAA GGCCATGCTT AGGAGCAGGG TGCCATGGGG
  TTCTCGTGAC ACAGGTGAGG GACCATTTGA GCCCACATAT GTTCCTAGGC AGATGTGCCC
  GTTTGTGGGG CAGCACACAG CCCTACACAG CTGAACGGCT TCACAAACAA TACTGGTCCT
  T
  TTCAAGAAAA GTAGGAGGTC CAGCTGCTCA CGTCAAGTGT CTGTTTTGAG GCAGGATCTC
  ACAGTGTGTT CTAGATGACA CCATACTTAC TATGTAGCCC AGGTTAGCCT TTAAGTTCAT
  CACTATGTAT CTCTTTACTC CTTTTTTTTT TTTAAGATTT ATTTATTTAT TATATGTAAG
  TGCACTGTAG CTGTCCTCAG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321433799	CHEV_4_151352566	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239195247					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152062914 () rs orientation: forward

Symbol	Name	Function Class
Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	Intron
Rr605686	regulatory region 605686	522 bp distal
Rr605687	regulatory region 605687	202 bp proximal
Rr605688	regulatory region 605688	389 bp proximal
Rr605689	regulatory region 605689	1916 bp proximal