rs239181892 SNP Detail

Summary

• ID
  rs239181892
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141455966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGCAGGTG GGTTTCTGTG
  AATTCCAGTA CAGCCTAGGC TACATAGTGA GATACTGAAA GTTTTTGTTT GTTTGTTTGT
  TTGTTTGTTT TGTATTTACA TATGAGTGTT TTGCCTGTAG CTATGTATGT GCACTGTTTA
  GGCCTTGTGC CCTCAGAGGT CAGAAGAGGA AGTCGGATCC CCTGGAACTG GAGTAAGAGA
  C
  GGTTGTAAAA GCCAAGCCGG GTTTCTTAGT TAGAGGCCAG CCTGGTCTAC AAAGTGAGTT
  CCAGGACAGC CCGGGCTACA CAGAGAAACC CTGTCTCGAA AAACAAAAAC AAAGAGATGG
  TTGTAAGTCA TTATGTGGGT GCTGGGAATT GAACCCAGGT CCTCAGTAAG AACAAGAAGT
  GTTGTTTGTT CATTTTAAAG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389325	CHEV_4_141284570	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239181892					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141455966 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	848 bp upstream
Rr603867	regulatory region 603867	413 bp proximal
Rr603868	regulatory region 603868	897 bp proximal