rs239103119 SNP Detail

Summary

• ID
  rs239103119
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151272799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAAGAAACT AGTCAAGGAA AAGAAACTTT
  TCCCGTTTGG AGTTTGGTTA AAGAAGGAAT AAAAGGAGAA ATTGGTGAGA AGAGACAAGA
  GGATTAAACA GGATTAAACA CTGATGCAAT TCAtgtgtgt gtgcttgtgt gtgtgtgagt
  R
  tatgtgtgtg tgtgtgtgtg tgtgtgagtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
  CATTTGTGAT ACTTAGAATT TAGGCTCTTT TGGAGTATTT TGTGGGAAAT CATTTTTTTT
  TATTTTCAAT CCTCAGATAA GTTTTAAAAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321026074	CHEV_3_151230126	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239103119					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151272799 () rs orientation: forward

Symbol	Name	Function Class
Rr587404	regulatory region 587404	661 bp distal
Rr587405	regulatory region 587405	192 bp distal
Rr587406	regulatory region 587406	284 bp distal