rs239097457 SNP Detail

Summary

• ID
  rs239097457
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148267802 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAACCTAAC ATCCTGTCTG GTCCACGCCA GAGTCTATGC
  GCGGACTTCT TCCCCACATT GAGAGTTCTC GCTACCTCTG CAACCTCTTT TTTTTTTTTT
  Y
  CTTTCAAAAA GATTTTATAT TATTTTAATT GTATGGGTGG AGTAGGGAAG GACAGACAGA
  AAATCAGAGA TAGAGTGATA GACAGAGACA GAAACACAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321417866	CHEV_4_147557454	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239097457					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148267802 () rs orientation: forward

Symbol	Name	Function Class
Gm68601	predicted gene, 68601	within coordinates
Rr604623	regulatory region 604623	313 bp distal
Rr604624	regulatory region 604624	1026 bp proximal