rs239074611 SNP Detail

Summary

• ID
  rs239074611
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:13151374 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGAATCAT CATCCCTGAC
  CTCAAGCTGT AATACAGAGG AATTATTAAA AATTGTATGG TATTGGTATA GAGACAGGCA
  GGTAGATCAG TGGAATAGAA CTGAAGACGT AGAAATGAAC CCACACACCT ATGGTCACTT
  GATCTTTGAC AAAGGAGCTA ACACTATCCA GTGGAAAAAA AAGACAGCAT TTTAAACAAA
  Y
  GGTGCTGGCA CAACTGGCGC TCAACATGTA GAAGAATGCA AATCAACCCA GTCTTATCTC
  CTTATACAAA ACTCAAGTCC AAGTGGATCA AGGACCTCCA CTTAAAACCA GGTACACTGT
  AACTAATAGA AAGGAAAGTG AGGAAGAGCC TTGGACACAT GGGCACAGGG GAAAATTTCC
  TGAACAGAAC ATCAATGGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321747166	CHEV_6_13101375	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs239074611					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:13151374 () rs orientation: forward

Symbol	Name	Function Class
Rr626556	regulatory region 626556	825 bp proximal
Rr626557	regulatory region 626557	1070 bp proximal