rs238830616 SNP Detail

Summary

• ID
  rs238830616
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:141458513 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCTCCTTT ACCTGGGCCG
  TCTCACCAGC CTGTTTCTGT TTTTGCTTTG TTTTCTGTTG TTTCTTGTTT TTCAAGACAG
  GGTATCTCTG TGTAGCCCTT GCTGTCCTGG AACTATGTAG ACCAGGCTGG CCTCAAGCTC
  ACAGAGACCC ACCTGTCTCT GCCTCCCCAG TGCTGGGATT AAAAGTGAGC ACCAACAGGT
  T
  TGGTGAACTC AGATTGTAAT ATAGGTTCTG GGCATCCAAC TTCTTCAGTG GGCTTCCACA
  TCTAGGTACT TCATCCACTG GACCATCACC CTGGCACATG CTGGTTGGCT TTAAAATGCC
  TGGATTGTAA ATTCTTTTCC TTTTGAGCCC AGGTCTCTCA CTATCTTGAG GCCCTGGCTA
  TCTAAACCAG GCTAGCCTCC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321389342	CHEV_4_141287117	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238830616					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141458513 () rs orientation: forward

Symbol	Name	Function Class
Gm34863	predicted gene, 34863	within coordinates
Rr603867	regulatory region 603867	1651 bp distal
Rr603868	regulatory region 603868	1385 bp distal
Rr603869	regulatory region 603869	550 bp proximal