rs238702944 SNP Detail

Summary

• ID
  rs238702944
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107601960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgagttcca ggtcagccaa gggtaataca
  gtgagactct gcctcaaaaa aGGAAGAAGA AAAGAGATGA GGGAAGAAAG AAGAAAAgag
  gagaggagaa aagagaagag gagaggagga ggaaaaggag gaggaggagg aagaggagga
  R
  gaggaggaag aagaggagga gggaggaaAT CATCTATTCT GTTTCCAAAA TGGGAGGCTT
  GGCCTCCATG TCCCCATGTC TGGAGGTGAT GGAAGGGGAT TCAGGGGCAA AGCAAGCCCT
  CATATCAGTT GGCTCCTGCA AGGCTGGAAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321250736	CHEV_4_107417368	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238702944					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107601960 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	479 bp downstream
Rr597058	regulatory region 597058	345 bp proximal