rs238613901 SNP Detail

Summary

• ID
  rs238613901
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151631574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGGTGGGG GTGGGGGTGG
  GGGAATTAAC CAGAGAGTGA TAACGATGAT GCACGGGGTT GATTGTAGGA GCAGCGAGGT
  TCTTGTTTAA GTGAAAGAAG GCAGGGTCCA GGGCACATGA AGAGGGAAGG GAGAGAGGGA
  GAGGGAGGCA AAGCAGCAAT GGGAGGATGG GGGTGGGACG ACTGTTATCC CACTGACTTC
  Y
  GTCTGCTCAA GGTAACATTG AGAGGAAAGA GATGAGAGGT TTCAGGAAGC TACAGAAGGA
  GTGAGCTGGT TGCCACGTGA CCTTCAGAAC AAGGCAATGT CACAGGCCGC CTGGGGTTGG
  AAGAAAAATA CACAGCATGG GAAAACATAT CTGGACAGTA TTATTCTTTT AAGTTTAGAT
  ATATGTTTTA CTTTTAAGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320561289	CHEV_2_151615390	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238613901					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151631574 () rs orientation: forward

Symbol	Name	Function Class
Rr567201	regulatory region 567201	416 bp proximal
Rr567202	regulatory region 567202	1604 bp proximal