rs238600486 SNP Detail

Summary

• ID
  rs238600486
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:103277963 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAATTCAGGG ATACAAGGAT
  TCTATGCAAT ATTTGTAAAG TTCTTGGGAC TCATTACTCT TGGGACCCAT GCATTTTCAC
  CATAAAGGAC TGGGCTGGCA TCATTAACTT CATCGTATAG AAGAGACTTA CCTTACCTTG
  AGATCACACA GCAGAGATAA AGATCTGGTG TCCACATGTG ACCACTTGGG TTCTAAAGAT
  K
  TATGAGTTTT CCTATTGGCT GATGAGGATT AAGATCTTTA AGGTTGTCAG GACCTCAGGT
  GGGAGTTAGG TGTTTCTCTC CTGGGGAGGT GGACCACAGC TAGAGTGAAA GTAGAAGTCT
  AAGCCTACCT CCTCCATCCT GGCTGTCAGG CCTGGGGCTG CAGCTCCCAG GCTCATCAGT
  GACCAAATCA AAACTCTCTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321237094	CHEV_4_103093371	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238600486					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:103277963 () rs orientation: forward

Symbol	Name	Function Class
Gm12718	predicted gene 12718	within coordinates
Rr596398	regulatory region 596398	831 bp proximal