rs238584497 SNP Detail

Summary

• ID
  rs238584497
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22536833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTGGACTC TCCTGACCAA
  TGACTTGAAA AGAGGTTTCT CATGCCTAGT TACTGGGGTT TTTGTTGACT ATTAATATAA
  CTACAGTTGC AATTTTATTT AAAGTCTATA TTCATAAACA TATATAAATA TTATATGTAA
  ATCTAGATAA ATATAAAAAT ATGATTCCCT GTTTTGTTTT TTCAAACATC CTTGGTGTTA
  K
  TGCCCCCCCT CTATTTTCTA TACTCATTCT AATAGTCAAA GCCCCCCTCT GTGTCTCTCA
  TTTCCTTCTT CACAGCATCT GCATACTGCT ATTCCTCTCT CTAGAGTCCC TTCTCCCATC
  CCATAAACTA TATTCTAAAT GCTCACTCTT GTGTAACAAA CTTTGATTAG TCTAAAACAG
  CTACAAGTTA TGGGATATCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321765803	CHEV_6_22486834	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238584497					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22536833 () rs orientation: forward

Symbol	Name	Function Class
Rr627119	regulatory region 627119	575 bp proximal
Rr627120	regulatory region 627120	631 bp proximal