rs238582711 SNP Detail

Summary

• ID
  rs238582711
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:103829687 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gatcttact gccttactct tgttctcagt
  ccatagttgg tacatttttc catccttaaa gactttagaa tatagagaac gtatagagta
  attatcaagg tcagatgata gtgggagaag tgtttcacat tggtaggaat tttttgaatg
  R
  attgtttctg agagcctcct acctgtattC ATAGAAGTTA AATTTAAAGG ATGTAAGTTT
  GATGAAAAGA TAAAtctctc ctctccccct ctaccccctc ccctcccctc cccttctctc
  tctctctctc tctctctctc tctctctctc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320443513	CHEV_2_103839499	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238582711					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103829687 () rs orientation: forward

Symbol	Name	Function Class
4931422A03Rik	RIKEN cDNA 4931422A03 gene	Intron
Rr397165	regulatory region 397165	1904 bp upstream
Rr562001	regulatory region 562001	1849 bp proximal
Rr562002	regulatory region 562002	1936 bp proximal