rs238547364 SNP Detail

Summary

• ID
  rs238547364
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:85109330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTAAAAAC AACTAGGCAA
  TGCTCCTTAA ATTGCTATTT TGAGGAATAT GAGGAATATT GGCATTAACT CTTTGAAAGT
  GTGGTAGAAT GTCATGCTGA ATCCATCTGG CCCTGGCTTG TTTTGATTGG AAACTTAATT
  AGTACTGCTA TTTCACATTT AAGACTGCAA TATTCTCTTC TGGGATTTTT ACCTTTGATG
  R
  GTATGTGTTG TCTTGTCCTG TACCTTTTGA TTAGTTTTGA TTTGAAGCCT ATCTTGTCAG
  ATGTTAAAAT GGCTCACTCG CTTGCTTCTT GAGTCCATTT GCCAGGAATA CATTTTTCCA
  ATTTGATAAT TCTTTCTTTA GCTCTGTACC CCATTTCAGT TGGATTATTT GGATAGTTGG
  TATATAATTT CTTAAGTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320372988	CHEV_2_85119143	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs238547364					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:85109330 () rs orientation: forward

Symbol	Name	Function Class
Rr560461	regulatory region 560461	1632 bp proximal